YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20214
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDEPVKVVN KWDGPTVKNA LDEVVKKILN DKVGWTESHN LMNLRLLISF IGVAFSAFAC  60
   61 GYDYYEPFPK SKIVLAVCSV SYFICMGILQ MYQWYVEKDC IYEATEVDGK QSRKWAWSSE 120
  121 IKAHDDKYTL SAEFKKEGRS GQGKITKSIG AYIDNDGEII VPLVKKEVDD LYNRLIRSEQ 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	43	0.87
Transmembrane Helix	44	65	0.88
Non-Cytoplasmic	66	72	0.77
Transmembrane Helix	73	92	0.88
Cytoplasmic	93	180	0.85