YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20171
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLPRLALRA VHTTARLSGG QEFYWGPDKA AGRELVGYGA NGDNIYQDRL DYWYPAIRFR  60
   61 KEDSVIAPIR AKEQADWKNL SAEEKKLLYR YSFRQTLSEF EAPTGYWKVI SAVILSVLGL 120
  121 CTYYAVLLNV CVYPELPPTF QNEYKEAQVE RALVLEKGQF LGAPTHYDYE NKKWK

Type	Start	End	Confidence
Cytoplasmic	1	104	0.64
Transmembrane Helix	105	127	0.63
Non-Cytoplasmic	128	175	0.91