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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: atg-9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETQNLLQK IDNSSINLIF FQKKTHQMFN SQSKRAYQQI DDDFDDEVLR NSTCTSRFMQ  60
   61 GWGSSTRSLL FGGASNDEQR NLIASSSSHH SYHDSPAEEP PETHYEQFTA THNHGPPTMA 120
  121 SSSQLNSRRW DHVLNLDEFF THIYEYHQNG GYLCIVLQKV FSLLQFIFVM SFTTFFTQCV 180
  181 NYQFLFANTN VTSHGTVNQG KRHFGDAVVD NCPAHISIWM IFAILAAIVY WITRVIKHAQ 240
  241 YIMKMSEIQQ FYAHELKIAD DQLPNLTWHA IVKRICEAQK KLRLSIHQDN ITSIYIYHRI 300
  301 LRYKNYMTGM INKRILHPVF DVPFLGPIAY LPNNLKHEIE RILFTSSTSA WTNGPNLREE 360
  361 YKHHEQLDMA AKKMKEDVIN LFLQILRISV ARPDASTAPI PDYGIVLLTD GAHKKTTRWA 420
  421 WNEKIQYLLR HFNELDHELS ARLNRSHIYA AAYMDQFFSP VLEIAAKNIT FIAAAVFGVL 480
  481 TILSAWDEDV LQVEHVITVL TICGIVVLVC RGMIPDENLV WQPEILMTHV TSELHYLPST 540
  541 WKGKAHTTGV RHEFDQLFQM KWMFFVLELT SPIFTPFVLL FWLRPRCSQL ANFFHDYTER 600
  601 VDGLGDAPKQ KLKIQKNYIL TIFCRFEQKN RNFCKFTQIF QIFPDQILPP RNILLESVHS 660
  661 IVPTTSGGIS ASQVAPGRHP LIGDGLHRID GPVGNAFQGI QGAKLGSGGV LASLYQEQPR 720
  721 AAESLSNSLR ASGVDIDGAG AEMRINALFL RGLHDESIIH SSSRNYGGTT SSFNMHPTAM 780
  781 QSVFAMPDGF GQPAPAVESS LIDIETPTYH RESVQRSAAE HKMEHETPEP LAELPDLPGP 840
  841 SSSEHQQRSR LVPNTQHRQI NEEEEEEEEE DNTPPLSFSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle