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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE19980
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTQSEFYRG VQIGFLEDTT MKNFAYYLGI HFLVCVFVNG QYRCECPVGV SRLADGRCLV  60
   61 VNECARPSLN ACHKDAQCVD LAEGYTCRCN SGFADTSPDK VNKPGRQCQK TTNECGAKQT 120
  121 YGVDCDENAA CVDTPEGFQC VCQPGYADVS TSISKLPGRK CVESVNECTN GEADCSNNAD 180
  181 CFDRADGYEC KCRPGFVDAS PNVDKYPGRV CNKPKAPEYY GQQSRQPQCS EGSGCGPNEE 240
  241 CRFNTAGEKV CQCRRGSVQQ SNGVCKVFSQ CEQANECDRN AFCSNTYDGP KCQCKDGFLD 300
  301 VSPDPVRLPG RKCQQVRNEC ADGSHDCSHQ AACQDTPTGY ICSCNSNCID VSSRYNLPPG 360
  361 RKCSVAANQC SDKSLNSCDE NADCVQLPDG YTCKCFAGYV DVSSNANLPP GRVCTLSTAC 420
  421 PAQPTDLVFL IDGSGSIGSY VFQTEVLRFL AEFTELFDIA PQKTRVSVVQ YSDQIRHEFG 480
  481 LDNYSDRKSL QNAIRNIEYL TGLTRTGAAI EHVANEAFSE RRGARPVGQV SRVAIVITDG 540
  541 RSQDNVTRPS DNARRQDIQL FAVGVTNHVL DAELEEISGS KDRTFHVSGF EDLNTRLRSA 600
  601 IQRVACPHQN NEDTYNKGPC DPSNHNGCDR SLNQVCQQKN GKFVCACPAG FDIHPVTKVC 660
  661 GGDICNPEIA TSCPDPEICE KTPFGNWRCT CPADLGWRDR LTGVCKIGEK PVQTSESNDE 720
  721 CSPNDVHSCP ANSKCEKGAG GEFICKCDAG FQRNGRTNKC EAPGTCDPRM PDSCDARKKE 780
  781 KCLPDGRGAF ACMCDRHHKR HPVTDICLID ECAAGVADCD PNAKCTDTDE SYICTCNEGF 840
  841 LDKSPEQNKK PGRVCSKQRN ECLDGTHNCS MNADCIDLPD GFLCRCKEDF VDISPNPNAF 900
  901 GGIDCRALVN ECLITGGHNC HEHAICIDTR DSYKCQCKEG YVDHDELRNP GRTCKKLNQI 960
  961 CESGKHECDK NARCVEKGAN DYECVCNAGF IDKSPLTHRP GRKCVEPICS DDSKHDCHSA1020
 1021 AICEENDSVP EKYTCKCRDG YLDVGAVMGG GKSGRECKEL VNECLSASLN SCDAAATCID1080
 1081 LDDGYTCKCP LGSKDESPVP KLPGRSCKGL VNECNIPHLN NCSHFATCID LEEGYECKCK1140
 1141 PEYHDQKPEQ PGTECKFIIN ECLAENLNDC SPNAMCIDKI DGYDCKCKAP FQDEMPSNPG1200
 1201 RICRFDECAD PKDNDCDKHA LCIDTDDSYT CQCKEGFFDE ISDPKKPGRV CIEVGLVIEP1260
 1261 QNQSEDPTTP DPNTIKCGNG LCHLDLGEVC VGGATCSCRP GESRDNEKEK CVPTTSIPLV1320
 1321 VRVMEYDGEP IQYRTDYSKP DTQAHIEIVD AVKKSVGKII GKTDVAPRFV TTDVNYITNP1380
 1381 KVQNSEWDKG LLGNVSVHLA GKEEVDKCRF YEQFAEIVRE MGGRVDRIKL SDDADLDPCK1440
 1441 KEEEKKGIPC GNTFCSIELG EECIAGKICG CPKGQKRKDA NSPCRAVESW NLPLYVIRDG1500
 1501 HEKITYSPSL SNPLNDDHKD LVSRFESGVA QSYDKTPLKG AFVTAEVNEI ENPESRKKSW1560
 1561 DTGILYNFTS HFVKGSVAEP ASVFTDLIDY IQKRNDFEVG KSKLFISPEQ LNPFSNCYHS1620
 1621 DCHPDAICKE VGKGYTCTCP DGFRDLNPSR PGRNCLSYRG VNECEKPELN ECSPHARCID1680
 1681 LDYLYKCECI RPYVNSAVGD ALPGSVCSID YCQDVNYCPL NSTCVNVDEQ TYDGQARCDC1740
 1741 KPGFVDLRKS GHLSEAGLGE SICRRQSDID ECALGLHNCS AAAICIDKKI GYECQCQEGY1800
 1801 EDGNPSQPGR ICAASLCGLC NGHGDCIHDA LSSNVTCACL DGYTGQFCET APSNLPLILM1860
 1861 TLLALLFLLL TLLCCLYMCA RCRCFGARGR SEGSASGQEI LGSDYYTIPR AKLARPLYGD1920
 1921 EMGDDHAGAL AAYLDDGASI SSDGSIEEIE RRVTTDVTTR EVRTTTVRDD DGNIISQSQT1980
 1981 ISHGNPHETD TEQYGMISSD HYKTSASEAM DAAMSTSASG AAYNQSSGAM MSSASGHKSA2040
 2041 YNQGYASDSE DSDAGHAVYD RTTRTNQSHD FEPGADPRTG TERSKREFVT TTKAEEVNYF2100
 2101 

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