YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE19917
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIFWSLCIF LVAISSGSLG FTSANSIVTP QWLMQNFDNV RIIDASYVET AALNNAKFNT  60
   61 NHPEIIISDI KSPDLYTDEH IPGAVHFDLD IGSYSSEYIK HDLYPPEHFQ KYLRLLGVNN 120
  121 GDQLVIYSNG PASGMKFASR AYWTFKMYGF TTVSLLNGGM DVWKAAGGPT DNAVVTPKLG 180
  181 NVNVKSLDNT ILAKFEEIPF NNFAETNTVY LDTRIRAQFD GEDPLATNFP GTKAKGSHVT 240
  241 GAINFPMAKV IGPDGFISQQ DVDEQISSLG LTSASQVFVG CNTGMQASVI FVALERSGFK 300
  301 AKLYNGSMFE LSYRAPELVN ATGI

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	324	0.98