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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70779501, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRRGFHAF VLMLVTCVHC TLGMETNKDI PTEKLLVLTV ATQETDGFLR FMQSANYFNF  60
   61 NVKVLGMGEE WKGGDVGHSI GGGQKVRLLK EAMESLDQQE DLVVLFVDSY DLIFAGGAEE 120
  121 ILRKFQQSNH KVVFAAEGII WPDSQLAEKY PSVRSGKRFL NSGGIIGYAP YIQKLVSQWD 180
  181 LHDNDDDQLF YTKIYVDPIQ REKLNMTLDH KCEIFQNLNG ALDEVLLKFG TERVRVRNTI 240
  241 YNSLPAVIHG NVNTKVYFNY LANYIPNAWN YERGCTICDQ DMVDLSQLKE FPQVTVGVYI 300
  301 EQPTPFLPEF LERLLSLDYP KDKLNIFIHN SEVYHEKHIQ KFWEENKDVF GSFKAVGPEE 360
  361 NLTQGEARNM GMDVCRRDPS CDYFFNIDAD VMLTNRQTLK LLIEQNRKII APLVTRHGKL 420
  421 WSNFWGALSL DGYYARSEDY IDIVQGKRVG VWNIPFLAHV YLIKGQTLRN ELKERNVFVL 480
  481 EKLDPDMAMC RNARDLTVHR ERESPSPESF HMLRSPKGLF MYLTNRHEFG RLISTANYNT 540
  541 SHYNNDLWQI FENPLDWREK YIHANYTRIF TENLLEQPCP DVFWFPVLSE KACNELVEEM 600
  601 ENHGTWSGGK HEDKRITGGY ESVPTDDIHM KQINYDQEWL HFIREFISPV TLKVFSGYYT 660
  661 KGYAIMNFVV KYTPDRQAYL RPHHDSSTFT INIALNNKGL DFLGGGCRFH RYNCSIESPR 720
  721 KGWSFMHPGR LTHLHEGLPV TNGTRYIAVS FVDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle