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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tat-6
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQNFTQSAY LNQCVSTEDF SVSFVKSEND DVATRIRDKT EISKSNRTQF PGTSPFEKLT  60
   61 VWFQSLMSRQ RALHSRTVRI GYGPIDHDSP RTFPPNTVRN QKYNIFSFVP VVLFQEFKFF 120
  121 LNLYFLIMAF SQLVPIFKIG ALVTYWFPLG FILTITLIRE AIEDFARFLR DRELNSEKYE 180
  181 KLTRDGTRVE IKSADIKVGD VIVMHKDRRV PADVVLLRTS DKSSSCFIRT DQLDGETDWK 240
  241 LKIPIPFTQH LANESEIMEL NCEVYAEKPQ KDIYSFVGTV KITADDKIHE GSLDVENVLW 300
  301 ANTVVSSGTA IGVVVYTGCE TRSVMNTTVP EYKVGLLDLE INNLTKLLFC FVLLLASVMV 360
  361 LMKGPTSLWY LYLARFILLF SYIIPISLRT NVDMAKLFYS WQIGHDHHIP ETVVRSSTIP 420
  421 EELGRISFLL SDKTGTLTKN EMHFKKIHLG TVAFSGDALE EVEQHVKSAY DSALVKHPFS 480
  481 AKLKNAVESL ALCHNVTPVL ENGELSYQAA SPDEVALVKW TETVGVKLAH RDLHTMTLDV 540
  541 QPSNGTTVPI QFQILHVFPF TSERKRMGII VKEETSGEVT LYIKGADTVM SDMVQYNDWL 600
  601 DEECTNMARE GLRTLVFAKK ILSRAELEAF DQAYHAAKMS ITNRTQNMAN VVKNMLERDL 660
  661 QLICLTGVED RLQDQVTTSL ELLRNAGIKI WMLTGDKLET AICIAKSSGL FSKSDHIHVF 720
  721 GSVQTRTDAY NELDNLRNKT NIALVMPGSS LNICLQYYEE EVAELVCAST AVVCCRCSPE 780
  781 QKAQIVQLLR KYRAPLRVAA IGDGGNDVSM IQAAHAGIGI DANEGKQASL AADFSITQFS 840
  841 HICRLLLVHG RFSYKRSCTL AQFIMHRGLL ISIVQAIFSC VFYFVAVSLY QGVLMVAFTS 900
  901 CYTLLPVFSL IADRDVTATN ALTYPELYKE LVKGRTLSYK TFFIWVFISI YQGAVIMYGA 960
  961 LLIFDTDILH IVSISFSALI ATELIMVALT VHTWHWLMLV AQALSLGLYV VSLITLDQFF1020
 1021 DRKFVFSWVF ITKTTAITVV SSLPLYFIKT LRRKFSPPSF AKVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle