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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE19674
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKKNKKAA AAERSATLSA SASQQVAKDE QSAPVVPTPE LSRVSVSSNP PTPSAIEKPV  60
   61 PLPVPSKPLF EYEPPAQLEA LAKNKPVKVT TNSYELELKP TPVFRYDVSV LKSFDDSTRD 120
  121 PIELAGSKGG DRQRQADLTE IVKVALTLEG LGNLNIFYDG AAMLFTTQKF ETKTEKQQAI 180
  181 FMPIPSDHPK LSTSLKESQF GRASGKFHVS IELNSKQSEL NTIDLLNERL DSAACPVTQM 240
  241 AQIALSAEAK QNGFIILDGG HELFDQKNTR RTIGKDGVED MDGVAASIKM AQGNKKTGSA 300
  301 HLVMDYKKKQ FFKTGPLKDL IKGINPNQLR SYLKGLRVHT TYSHQSIFID GISNVPIGEI 360
  361 KLPDGTPLLD DCARVSGKPK SFFDASKPAV QVNQYNKREG RRMVYSFPIE NLLVKPNQKL 420
  421 TQNHGEPPRS IKPELRFDLI RKVGESAKLL SPNQTLKSIG IAINPEPIVV EAMTVPKPTI 480
  481 LYKDGAFTSP DLLNRTSWDV QARNHQSLKG GFVEPMKINK ILILYNSQSY SQASPKEAVV 540
  541 ELQSILSKKA KDVGMTIGQI DVEDLNDPDI IGAIENKMTI LKTSQVKPIV IYADHTSEGT 600
  601 HSTLKLQERL CEVITQQVAL DKSLKRTPGK VTANNLLMKL NLKYGGVNHK VRVDNSISHL 660
  661 WGDTSNTLII SYDVCHSSGK VYKKDEICDE PSCVGFGFNG TACPEAFIGD FHYQLPRHEQ 720
  721 VDEHLLKLRA RFMLNHYITS RKKYPQQVVI LRDGVSEGQH KMVRNEEFQA IKQSIMNVFN 780
  781 EKKAKAPSFA LLVVTKRHAN RLLIKDQNGY TNVPPLTAID QTIVKKQGNE VIFVSHCPLN 840
  841 GTAQPIVINT LVNDGIFKTN DQLVQFITAL CCAHQKSTNI VSLPESIYAA DEYAKRGADL 900
  901 FQSYKLKHRD LPTTTIDDST QLDYEKITLI LCFQTSSFKN KRIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle