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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7506642
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLLLRKMS SAVVTSAAEY DVRALEKLKD LYGDLAQIPI PTQGRIEKKS GDEFIKVTTT  60
   61 WDNRAMQLNK LTRQQRVSLI GKKGPEVTDR YLMTSVSVPM CNYENQRSVY SASNSRVAQL 120
  121 LTIGTGDDKK QYLKIYNLEE HVEELCADLS TQKKHGTIHG GGCMPFGCLH FSYGEGHVLY 180
  181 VAERNSKTSQ YFDADIEWDN ETKVFESKVG KKFELTESWG EQNDGVKQPV ICIVDISSGN 240
  241 VTALDQIPAN ISPSYTKWAP GDAGVVFFGL EEQDTPRLGR IYCNNRRGNL YYYELATAKL 300
  301 TKISEGEISA EELQFSPDGN TLVWFQRAAD GPHQAVLEMV AVEWPLKVDS AENIEKRIIV 360
  361 PIVKEKRSAD EFQGFTFPQT ATRSWSTDSK RLILSSSWCS KLELLSVNIA TGNIEKLTNH 420
  421 SICLGTWSLL DVYDNEVLAV VSAPNRPPNV LLGQLPGTGK AEEMVWVRID EAKAVDKRRH 480
  481 LFEFSWEFVN LERDGATYEG ILIVPNEGNN LPMVVNPHGG PHGASMASWP RRDLTTLLNS 540
  541 GYAVLQVNFR GSLGFGDDFI RALPGNCGDM DVKDVHNAVL TVLDKNPRIS RDKVVLFGGS 600
  601 HGGFLVSHLI GQYPGFYKSC VALNPVVNIA TMHDITDIPE WCYFEGTGEY PDWTKITTTE 660
  661 QREKMFNSSP IAHVENATTP YLLLIGEKDL RVVPHYRAFI RALKARGVPA RVLTYPPSNH 720
  721 PLDEVNVEAD YAINMVRWFE KSLSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle