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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE19525
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVPRGIGLV FIFAVAAALV AGLILTIVLV SRPSPAEPFT GRVITVGICN SGSEPSKASS  60
   61 FRFKRDATTS CSFDANRDQL KNFLSSSAAD TSFIVMSYSD KPSPSTVLPR DQAIELLNSM 120
  121 KKDGSKTIQQ APAFASYDPK AYENSDLVFF TPCKTDYTGY DADMAAVRTT INNVQTKKYV 180
  181 IVSLAMDQGN MTQKYGDLNT HNIGNNATDI TNDINNVLNI TAATSPSTAV TSPSSLGTSS 240
  241 SPLPSSISTS ALPIASSSAS SSPSAASSTT PVVLSSSTIQ SSSGTFPSSV ASSPSTVGST 300
  301 SGAASSSSYA TVSTIAGSTG STITPVPGSS STIGSSTPSA SSSSSGTMST ISGSTGSTVT 360
  361 VVPGSSSTFA SSTPIASSSS PGSTVTVAPG SSSTYGSSTP SASSSSSGTM STNSGSTGST 420
  421 VTVAPVSSST FGSSTPIASS SSSGSTVTVV SGSSSTYGSS TPSASSSSAG TASTISGSTG 480
  481 STATIVPGSS SSVGSSTQSA SPSSPGTMST VSGPTGSTVT VVPGSSTSPA PSSSPNPSSS 540
  541 PASTGSTITI SGSSSIIVST VSGSTVSGST GTSQSTLASS TATPGSSSTV PSSSSPQPSS 600
  601 QSPAPNTGST TPSQTSSQSP SPSMNPSSST PTGSSQSTIT PEGSTASSPT GSTGSTFSVA 660
  661 TEVTSQSTVP SGSSLGTQST NSSPSPSSLS PSTSGMSTLT SEPSPSSTQS SGAQSTLTTP 720
  721 SPNPSQSTSS LESSTSGATT SSGSAGTTMT SPSQSSSVGS SQGSTSPAAS TTSGEMTSQG 780
  781 STQTPGSSVS TSAAILTSTQ QSVSTNSPGS TVTRPSTVSG STSSGSTVTV GSTEASTSGS 840
  841 SVASSSPAPS TSQNPNPSTS SGSSMITQSP YPSQSTSPVE SSTTPSPGSP GTTLTSTSPS 900
  901 PSQSTTIGST QGSTSPGIST TSEEMTSQGS TQTPGSTGST VTQPSTVSDS TSSGSTVTVG 960
  961 STEGSSSPIP STSQNTNPST SSGSSMSTQT PQSSQSTSPV ESSTSGATSS SGSPGTTLTS1020
 1021 ISPSPSPSST IGSSQGSTSP VVSTISQGST ETPGSTGSTV TKPSTVSGSA SSGSTATMGS1080
 1081 TEASSTSGGS STSPNPSQST SPSTSGATSS PGSSGTTLTS ISPSPSQSST IGSSQGSTSP1140
 1141 VVSTTSGDMT SQGSTQIPGS TGSTVTQPST GSGSTSTSGE ITSQGSTQTP RSSLSTSPAI1200
 1201 STSTQQSVST NSPGSTVTQP STVRGSTSSG STVTTGSTEG SSTSGSSSAT SLSSSSPVPS1260
 1261 TSQSPNPSTS GSSTPTPNPS QSTSPVVSTT TGEMTSHGST QTPSTIGSTV TQPSTVSGSN1320
 1321 SSGSTVTIGS SEASTSGSSF KTSPSSISPV PTSSPIPSTT FASSTSGSTI SDVSSVSTTS1380
 1381 LAPLSSSLPS TVPSSTQSFS STSEGSSKAS SSPVPSQTSS TPTNPTGSTE SSTLLSSTIS1440
 1441 GSTQHTTMSK ASSGSTSPST NSQTGSTVTM GSSSTSGVST SSASSTQPQM STSQGSSAGS1500
 1501 TVASSTASPA ASSTAPSSTG TMSSTSSGTV GSTISESSTT ASASSQTGST VTMGSSSTSG1560
 1561 VSTSSASSTQ PQMSTSQGSS AGSTVASSTA GLVSTSTVPS STGTMGSTSS GTVGSTISES1620
 1621 STTASASSQT GSTVTMGSSS TSGVSTSSAS STQPQMSTSQ GSSAGSTVAS STTGLVSTST1680
 1681 VPSSTGTMGS TSSGTVGSTI SESSTAASAS SQTGSTVTMG SSSTSGVSTS SASSGQPQMS1740
 1741 TSQGSSAGST VVSSTASPAA SSTAPSSTGT MSSTSSGTVG STMSQSSTAA STTSHTGSTV1800
 1801 TLGSSSTSSN QMSTSQGSSV GSTVASSTAG LVSTSTVPSS TGTMGSTSSG TVGSTISESS1860
 1861 TTASASSQTG STVTMGSSST SGVSTSSASS TQPQMSTSQG SSAGSTVASS TAGLVSTSTV1920
 1921 PSSTGTMGST SSGTVGSTIS ESSTAASTSS QTGSTVTIGS TSGTNPSSPR SLSQITITPS1980
 1981 PSQSTESTQT SLPSSSPSPS THSVSSSEGT TMSSGATTSG DKMSFLSSTG TTVSFSSRGS2040
 2041 SLATTSAPKP SVTCLFMYDT QSKEIDQTAI NTYKTYFNFA LLVASKLNNE SILTGYIDNF2100
 2101 GYSAGLNDHQ YYPTDDYNGI KSVPFPIDGT DDDIDLDLKD VDKSLATADW TPPVADQTCM2160
 2161 IFISAAPEDE YGGTTIKSTY TYFETVVGVL VGGAKSIPGL SIDKNIVITN NTMNDRDASA2220
 2221 VVSKLLELLP TA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle