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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE19479
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKFKMPRG IYLVFILAVS AALVAGLILT IVLVSRPNKA APFDGRVITV SLCNSNSEPQ  60
   61 ISSLRFKRDA NTDCSFNANK NQLRNFLTSS AEDANFILTT YSGTSTKTEP LTKQLALDQL 120
  121 EAIKADGSSA VKQSSAIESY DPSAYSNTDL VFFTPCQTNY DGIEDDIKNV QTAINKVITK 180
  181 TFVIVSLSLN STDMNSRYGE AAHNIPTTPT EDISNKINNI LNIGTTQTPP VTTSTMATTT 240
  241 ANVTSAAPNT TVTISTSPTT VVTVPSTAQT SSTTTVTVPT TTVTGPTTVV TVPTTVVTIP 300
  301 STVVTSPITT PSTVVTVPST VVTVPSTAVT KPSTVVTAPS TVVTVPSTVV TKPNTVVTSS 360
  361 PTVATTPTTV VTTPSTVVTV PSTVVTVPTT VVTNPSTVVT APSTVVTVPT TVMTSRSTVI 420
  421 TTPTTGGSSP STAGTSLAST AVTTETSIGS SSTPLPSQST SLSMSSLSTY TPSSSTAGAT 480
  481 SPATQQSTKP TIGTSMSSGP TTVAPGASTE STVLQSSTPS GTTVTLPSGS STATAGTSPQ 540
  541 ASTVTTVTDI STVSGSTVTS QTAESSLSTE SPTSAGSSIS TVSTVSSQPS TYIPVSSASS 600
  601 IYSTLSGSTG STASPGTTES SGSSTSGPST ISGSSASTVT GSTVTEASTI SGSTESSTIP 660
  661 GSTESTVSEA STVSGSSVST VSGSTESTSA GASTVSGSTG STVSDSSTIS DSTGSTNAPG 720
  721 STESTVTGSS VSTVSGSTGS TGPSTMSAST GSTNTPGSTE STITDGSTVS GSTGSTGSTN 780
  781 NPGSTDSSTT GISTVSGSSL STISGSTGST VSGSSDMTVS TGSTSSPGST ESTVSGASTM 840
  841 SPSTGSSVET STSGSSVSTV SQSTSSSTTG QSTVSESSVS TVSSESTISQ STGSTTTGES 900
  901 TVFGSTGSTA TGSSTMSAST GSTDTPGSTE STITGSTVTG ESTVSGSTGS TITEGSTISE 960
  961 STMTTVGVST GSTITGESTV SGSTRSTVTG ESTVSGSTES TVSGSTESTP TVPSTVSGST1020
 1021 GSTVTGESTV SGSTASTSSG STGSSTEAGS TVSGSSASTV TSSTGSSTSG ESTVSGSTVS1080
 1081 TVSGSTGSTI TGESTVSGST ESTVTAESTV SGSSVSTVSG NTGSTITGES TVSGSTGSTG1140
 1141 ESTILESSVS TVSVSTGSTI TDGSTASRSS VSTVSASTES TVSGGSSASI GSTNTPDSTE1200
 1201 STISGSTISG STGSTESSTM SAGTGSTETS TSGGSTVSGS SLSTSSTESS GSSSTQPPST1260
 1261 STELTGANNK FGHSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle