YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lips-7
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLIFIFSL TFTFSRISAD FTPHFRKFLH DSYGIAITGQ LERTDLGMDA SFGGKENPTE  60
   61 VPQNPVIIVH GITNKASRFG GTVAYLKSKG YKNSEIYGTT WGDSGRTPVG LVDMKCNYVK 120
  121 QIRAMIIAVR QYTGQKVDVI GYSMGSPLAR KAILGGQCVD TREILGAPLT ELVDTFLSVA 180
  181 GANYGSVLCI LPVPVGTCNK KNGLHCDSEF LQDINNQHRY EGSHVFSIFS TADEKIGFRS 240
  241 CGRPVSPIRG GTGFVKRDGL NHDQLMDTTH PLQRNFILYH SPKAPKSHRN VN

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	292	0.99