YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE19329
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILMIVSVL IILYFVLKPK SLKGFNPDGF IKPFISYAPS FFTAPDNKLI ACEIRKSMSQ  60
   61 LTLNMMCLLY NETQYLQDKN NFTNTWETST RKCTSETNFV TPSDSLKNDK DAVRFVFVRD 120
  121 PFRRFVSMYL NKCVVEKRCF DCETDMRCIA KKTYESFVEI QNNETKAAGI EYVEAHAAPT 180
  181 TWNCKFNEGV ENWELLPMDS DLKDRISSAA KLADILRKQG VRDTLVEQIY KDILTTETAH 240
  241 STHKWTKRLE AEKQVREDPI VREYLHKIYL YDYLLFPFDR SVLDPEYRDI NSISYLKKFS 300
  301 K

Type	Start	End	Confidence
Signal Peptide	1	19	0.58
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	301	0.99