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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cua-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKPKIRRA IVSIEGMTCH ACVNNIQDTV GSKDGIVKIV VSLEQKQGTV DYNSEKWNGE  60
   61 SVAESIDDMG FDCKLITDQE IAAVEPQKAS TTKLSISPLK TVDLSDGKVE LQLNGVKYSK 120
  121 EGSSDHLEKC TFAVEGMTCA SCVQYIERNI SKIEGVHSIV VALIAAKAEV IYDGRVTSSD 180
  181 AIREHMTGEL GYKATLLDSM GANPNYSKIR LIIGNLSTES DANRIESHVL SKSGIDSCNV 240
  241 SIATSMALVE FSPQVIGPRD IINVVESLGF TADLATRDDQ MKRLDHSDDV KKWRNTFFIA 300
  301 LIFGVPVMII MIIFHWILRT PMHPDKQTPI FTPALSLDNF LLLCLCTPVQ IFGGRYFYVA 360
  361 SWKAIKHGNA NMDVLIMLST TIAYTYSIVV LLLAIIFKWP SSPMTFFDVP PMLIVFIALG 420
  421 RMLEHKAKGK TSEALSKLMS LQAKEATLVT MDSEGRLTSE KGINIELVQR NDLIKVVPGA 480
  481 KVPVDGVVVD GKSSVDESFI TGESMPVVKK PGSTVIGGSV NQKGVLIVKA THVGNDSTLS 540
  541 QIVRLVEEAQ TNRAPIQQLA DKIAGYFVPF VIVLSLFTLG VWIYIEYNSA RNANLPPGLR 600
  601 FEEALKIAFE AAITVLAIAC PCSLGLATPT AVMVGTGVGA ANGILIKGGE PLESVHKVTT 660
  661 IVFDKTGTIT EGRPRVVQIA SFVNPSTMSL KLITFLSGAT EALSEHPIGN AVAAFAKQLL 720
  721 NEPTWPNTSR FHVSAGHGVT CRIDSIRQSF SSLALSGSTC EIPRLPDGQT ITIPGTEVNL 780
  781 LQVSSKEVSQ PNPDTANIVI GTERMMERHG IPVSEVVKMT LSEEQRKGHI SVICAINAEV 840
  841 VAVISIADQV KKEASLAIYT LREMGLRVVL LTGDNSKTAE STAKQVGIDE VFAEVLPNQK 900
  901 QQKIKQLKGY KNKVAMVGDG VNDSPALAEA NVGIAIAAGS DVAIESAGIV LVRNDLVDVV 960
  961 GAIKLSKMTT RRIRLNFLFA IIYNAIGIPI AAGVFRPFGF MLQPWMAAAA MALSSVSVVS1020
 1021 SSLLLKNFRK PTIANLYTTS FKRHQKFLES GSFQVQVHRG LDDSAVFRGA ASSKLSILSS1080
 1081 KVGSLLGSTT SIVSSGSSKK QRLLDNVGSD LEDLIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle