YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE19136
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFKLPFTF FRVKFKKNSF KILNLPLVAL TNVINQLDIQ SVSKLSKTSK KMRINIKNAR  60
   61 RKVHKLIIDN HFEYHIDKFH QPLFYQRIIL LETKSDVVSA YSYVANQENM NDYILTMYSV 120
  121 DFWIDWFHSI NNWNKKQRDQ SIFEYRSSKQ LLKFLNCFDG IFTIDHLDLI IDKDVLFGDY 180
  181 QSILNHPIFR KCHYIEIGGR DSNISTEEMQ FLLNKINVNY GMLVRCELLG SMNNEAMLKI 240
  241 PRLDIFTAEY ITLKDLVNMD CEVIKLWRHL FTSQHINQFI HHWMAGAVPK LRKLRLNYFC 300
  301 EPSWVDEILL GVKHSKWDRR RRPQFFCDGL ERVDCADGDD IERDDGLHAT VIFMHDAINF 360
  361 LVWHDKFSLN NNIK

Type	Start	End	Confidence
Signal Peptide	1	35	0.47
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	374	0.99