YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE19110
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHLLYYPT TLKVFQKILK ILEILEIKKF WKLGWKILFF GIFLFLTIIK LASSMPRPPV  60
   61 LPPWVATWLL VSGVICLVDV IYTMFRPYTN APDGFVSNTL FYGWKLYSSV DIRYADTKDV 120
  121 VTCSTGRVML IEITLNFLAV YLALKRSRHA LLLAFTTSAF VFWKTFWYLV MYINPPPGTP 180
  181 SFFTDNYGYL GITLIFWIPN GVWVVMPFLA MCSLWNKLAL PVEYQEQENN NYEKPPGLST 240
  241 LSSP

Type	Start	End	Confidence
Cytoplasmic	1	32	0.96
Transmembrane Helix	33	53	0.92
Non-Cytoplasmic	54	63	0.77
Transmembrane Helix	64	83	0.94
Cytoplasmic	84	149	0.93
Transmembrane Helix	150	170	0.92
Non-Cytoplasmic	171	188	0.90
Transmembrane Helix	189	211	0.89
Cytoplasmic	212	244	0.96