YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tor-2
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFAEKWFL LKFKFYVQCF FIFKFRYQCI NLFFGVISHG YFDVSKNTQI TSDIFCSISF  60
   61 SFTSHLSNIL FYSERKMQFF KYIIFVIILN QLVVDVHSLS MPMFLKCLFY TCCGETDIFN 120
  121 YHALYKDFDN KIFGQHLMAE SVVHSIKSHW HNEHSQKPLV LSFHGGTGTG KNYVTEIIVN 180
  181 NTYRSGMHSP FVNYFVATNN FPNKKYIEDY KLELKDQLIR SARRCQRSIF IFDETDKLQS 240
  241 ELIQVIKPFL DYYPAVFGVD FRKTIFIFLS NKGSKEIANI ALEHHENGKI RSQLELKHFE 300
  301 RTLMLSAFNE EGGLRNTDMI SNQLIDHFIP FLPLSKFYVS QCIQVHLRKR GRHDLAKDGE 360
  361 FMQRVLDSLE FFPESSKIFS SSGCKRVNAK TDLEISKMGF SLNSKKEFND EL

Type	Start	End	Confidence
Cytoplasmic	1	19	0.82
Transmembrane Helix	20	42	0.74
Non-Cytoplasmic	43	49	0.87
Transmembrane Helix	50	72	0.76
Cytoplasmic	73	78	0.82
Transmembrane Helix	79	99	0.77
Non-Cytoplasmic	100	412	0.93