YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE18967
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDANDYPRLY YTSMPSSSTS MVTTTRFSTS FSPSIPCHRQ ENFRRHSTSA LAKRNGSESE  60
   61 KSAEIRENPD EIEVSRVSGR DSSLAFYTTA HETSSMLSRD SRDETLTPNE HIHQASSRRV 120
  121 SANDSVFEDG YVDFVDEPRE HGSRRKSFEK FTDRNGEEKE GRVFELSTPQ PTREAAPGAH 180
  181 QFQLPTLLVT STPTTVFDHS DDEVWTPYRP PPNREYSSSS EPMMGDLTFR LQSGIHKKSI 240
  241 AVEGTEIALR DLRNEALQFI KEIYPEKGCS SLEDYILLYK HDLRSINILQ LITTSSDVTD 300
  301 GTLVEVVIGS CPQNERIVVH PHTLFVHSYK VPTFCDFCGE LLFGLVKQGL KCFGCGLNYH 360
  361 KRCASKIPNN CNGSKQRRPS AIPLSPSNSN ILNLNERRHS RRESCLEALD AARPSSTLGG 420
  421 AATPNIFITS DDCGDAVGGN YLQMPRKDRS CSWSGRPLWM EIAEATRVKL QVPHTFQVHS 480
  481 YKLPTVCQHC KKLLKGLIRQ GMQCRDCKYN CHKKCSEHVA KDCSGNTKAS QFFLGSQADD 540
  541 GASEDRDDDL SLRSGSGAHK KAQNTPSAPL QGSEGSGSPG PVVSFAANAL SNMPDDDVIS 600
  601 SESANIPLMR VVMSKKQTKR KNNKLLKEGW IVHYTDQQNM RKKHYWRLDT KGITMYQDEN 660
  661 TTRYYKEIPL NEILNVSMSP PDKTADYLFE IRTGVCVYFI SGSPSDEKGS SLDAQSWTTA 720
  721 IQSALMPVTP QSSVVGGKRI DKLKVPTEGE TGHLGAKIQT EHEFSQLYQI FAEEVLGSGQ 780
  781 FGTVYGGIHR RNGQHVAVKL IDKLKFPPNK EDLLRAEVQI LEKVDHPGVV HFMQMLETTD 840
  841 RIFVVMEKLK GDMLEMILSS EKGRLSERTT QFLVAQILEA LRYLHHLNIV HCDLKPENIL 900
  901 LNSNSDFPQV KLCDFGFARI IGEKSFRRSV VGTPAYLAPE VLRNKGFNRS LDMWSVGVIV 960
  961 YVSLSGTFPF NEDEDINDQI QNAEFMYPPT PWKEISENAI EFINGLLQVK MSKRYTVTKA1020
 1021 QSQIWMQNYT LWSDLRVLEK AVGQRFVTHE SDDQQDPQRN FSYFLHLLVT YPFKFYFVFS1080
 1081 CFIIFFPNFL THIPCVPTPI S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle