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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40823
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQKAKEKL PGFMLLLLLT CTAPLAIGAT TPATRNVCNT PACITLAHML HNYHDPSVDP  60
   61 CDNFHQFACG REHEHETEDI YTKKTKTINN IMKRFLKKNE TSRSKSENAM RTLYKACKTL 120
  121 EKNSTASRNK ALQDIFQDIQ SIGAWPVVDD KWDESKFDLN DFLVNLVRLG RKNFGLFQMA 180
  181 RYVNVRNFAI GPEAAWRHNV DLGKTISEIL KANSVQTNNK KLLDDLAEYV NLEKALSQHK 240
  241 FNTVQPGYIF SERSDFVSSV NFSRLVLEMM SPDKRTLFPE VYQIMYLTNT SLFFGKNNNL 300
  301 ETIIRNTSKR ALANYLIFKF IDTSIADLTY GSPSAFCEQK VINFLPRAAL RAFYRNFISK 360
  361 ENRKKITKLT EATQVQLLKI IGATDWMSIK SKKIAMDRVS SMNMVIGYPD YFDPPGKLDG 420
  421 LFEHLNLSSS DTYYTVVRKI NRFMREQEMD YYTGEVPYYP LFPGLMTNAM YNANDNNLMI 480
  481 FAPFFDDPFF DSSFPDYANI AFTSNTLAHE MGHTFSPHLM DIMTGTTEVW LTPKETEEYE 540
  541 KRVKCLEDQY TEYDDPEYGR IAKSCIYNGS MVIDEIVADR IAIDVNWRDF KSSDRSKDQK 600
  601 IIGFEDYNLD QLFFRISAMS FCTPAPLSLE VSKASNHPAF AFRVNGVFQN VPEFAKTFNC 660
  661 PLGLPMNPVK KCKML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle