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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pxn-2
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLEFLLLIG ISLSTACPSE CRCAGLDVHC EGKNLTAIPG HIPIATTNLY FSNNLLNSLS  60
   61 KSNFQALPNL QYLDLSNNSI RDIEETLLDS FPGLKYLDLS WNKIRYVPKL STAPNALVSL 120
  121 NLVHNEISRL DNDLVSHSPY MQTFLIQRNR IQSLPHDFFN SRMVPTLKTV KMAGNPWSCD 180
  181 CRMVNVKQFA DSLFAHSNQN IFIVGKCFFP KGLRNYVFRN LSIENLECEK PEYSKTDDGM 240
  241 FKMSCPNNEM EGYHYDSIFL ENNKEARHTA HFARDKDGSL LSNGQFTRNY QCAFYRQKQS 300
  301 IHMQKKMQAS SSTEPPITTT TMEPMTTSTM DSMDTTESVV TMTTMPEIDT KIVFEHKQLD 360
  361 TTSRDGETLE LKCEASGEPT PTITWLFEKQ KLTESRKHKL TKNGSVLKIF PFLNTDIGQY 420
  421 ECVASNGEES KSHIFSVSLK ESEQPVIIDA PMDTNATIGQ QVTLRCNAKG FPVPDVVWLF 480
  481 EGIRIPRRNT RYTISDNNIE LTIEKVTRHD SGVFTCQAVN SVGSAVATAN LLVGAELTEK 540
  541 VDKLLDDSTI EKIAKEAKQK VEKALSSTKD QQRMDKIESP NDLSKLFKFA INLKKVDLGK 600
  601 AREIYEESIR LVQMHIDNGL AFESAMISPN VSYEAVLPVS YVQTLMEKSG CQTGQFAESC 660
  661 EDHCFFSKYR SYDGQCNNHE HPWWGVSEMA FMRLLPPRYE NGFNTPVGWE KGKRYNGYEV 720
  721 PNARKVSRVL IGTDETTPHS HLSAMTMQWG QFIDHDLTLT APALTRHSYK EGAFCNRTCE 780
  781 NADPCFNIQL EADDPKLHTG LYQKHPCMEF ERNGAACGSG ETSPIFQRVT YRDQLNLLTS 840
  841 YLDASGIYGN SEEQALELRD LYSDHGLLRF DIVSGANKPY MPFEKDSDMD CRRNFSRENP 900
  901 IKCFLAGDVR ANEQLGLMSM HTIFLREHNR IASRLLEVNE NWDGETIFQE TRKLIGAMLQ 960
  961 HITYNAWLPK ILGKATYNTI IGEYKGYNPD VNPTIANEFA TAALRFAHTL INTHLFRFDK1020
 1021 DFKETKQGHL PLHNAFFAPE RLVSEGGVDP LLRGLFAAPI KMPRPDQVLN KELTEKLFNR1080
 1081 FHEVALDLAA LNIQRGRDHG LPSWTEYRKF CNLTVPKTWS DMKNIVQNDT VISKLQSLYG1140
 1141 VTENIDLWVG GVTEKRTADA LMGPTLACII ADQFKRLRDG DRFWYENEEM FSKAQLRQIK1200
 1201 KVTLSKIICT NGDDIDRIQR DIFVYHGNST QFYEPCESLP EINLNMWTTC CDAMCSSSST1260
 1261 LARNAIGGDE KAKRRKRRHH HSKKSCHDKG KRRKSGDRWN HSNDICVECM CHDGEVWCKT1320
 1321 NNFCKSQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle