YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17540570, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREFLIEARK RVPLAIVGGS DFKKITEQLA DHDKDLCMSL LIFFFELQIL ISSFFPVLSL  60
   61 FDYTFSENGL YGFKGTEPYP VQSIQKAIGD AKLQELINFA LRYMSDIQLP VKRGNFVEFR 120
  121 NGMINLSPIG RSCSQEERMQ FVEFDKKHGI RQKFTEQLRE KFGQYGLQFA IGGQISVDVF 180
  181 PTGWDKTFCL QYLVPDFDTI HFFGDKTAPG GNDHEIFADE RTVGHTVEGP EDTRKHVENV 240
  241 LKELD

Type	Start	End	Confidence
Cytoplasmic	1	36	0.52
Transmembrane Helix	37	58	0.49
Non-Cytoplasmic	59	245	0.95