YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE18669
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMYVPLQPEN SPPASSTCRK LKYFWLFLGF FAFFGAYFYF YGDIKYSIVV DEKIVNFTGV  60
   61 EDFIPPFVDF DHGFFVAPDK KLLGCGIPKS MSQLMSNIMC FLYDENQYLA QHNSLNDTWT 120
  121 TERKCLEEDQ FLNPTFELLN DPDLVRFAFI RDPIHRFISL YLDKCIYTKS CYNCGTNMAC 180
  181 FVQRIYETLN RIKSNRRRLH EASSIEQHVA PLSWYCNFNE NIKKYSLLMM GADLEERRSS 240
  241 ILHLANILKR QGFSEKTVEK IQNDALGGET AHSTHKSSHR LEAERQVRED PVIRDLLHKI 300
  301 YFFDYVVFPF KRDQLDTKYQ TDFWKTPNF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	329	0.97