YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE18543
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIHDELQKQ DMSRFGVFII GVLFFMSVCD VLRTVSAEEH SHDENHVHEK DDFEAEFGDE  60
   61 TDSQSFSQGT EEDHIEVREQ SSFVKPTAVH HAKDLPTLRI FYCVSCGYKQ AFDQFTTFAK 120
  121 EKYPNMPIEG ANFAPVLWKA YVAQALSFVK MAVLVLVLGG INPFERFGLG YPQILQHAHG 180
  181 NKMSSCMLVF MLGNLVEQSL ISTGAFEVYL GNEQIWSKIE SGRVPSPQEF MQLIDAQLAV 240
  241 LGKAPVNTES FGEFQQTV

Type	Start	End	Confidence
Cytoplasmic	1	14	0.77
Transmembrane Helix	15	34	0.83
Non-Cytoplasmic	35	258	0.72