YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE18444
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRFAVFLAA FFVQDVVGSH GDPELHMTTP QIIERWGYPA MIYTVATDDG YILEMHRIPF  60
   61 GKTNVTWPNG KRPVVFMQHG LLCASSDWVV NLPDQSAGFL FADAGFDVWL GNMRGNTYSM 120
  121 KHKDLKPSHS AFWDWSWDEM ATYDLNAMIN HVLEVTGQDS VYYMGHSQGT LTMFSHLSKD 180
  181 DGSFAKKIKK FFALAPIGSV KHIKGFLSFF ANYFSLEFDG WFDIFGAGEF LPNNWAMKLA 240
  241 AKDICGGLKV EADLCDNVLF LIAGPESDQW NQTRVPVYAT HDPAGTSTQN IVHWMQMVHH 300
  301 GGVPAYDWGT KTNKKKYGQA NPPEYDFTAI KGTKIYLYWS DADWLADTPD VPDYLLTRLN 360
  361 PAIVAQNNHL PDYNHLDFTW GLRAPDDIYR PAIKLCTDDY LGK

Type	Start	End	Confidence
Signal Peptide	1	21	0.93
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	403	0.99