YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE18353
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQFLRSTN SRYVAGVLAA LGAGSAVYTL TPQQLQAKSE VDAATIKKIE EAYAKLNGPE  60
   61 GAKCKSLLKK HLTKDVVEKL KTKRTKLGAT LYDCIRSGVY NLDAGVGVYA PDAEAYTLFA 120
  121 PLFDKIIEDY HGFSPKQKQP PVDLGEGKTK EFPPLDPKGK YIKSTRIRCG RSLKGYPFNP 180
  181 CLTQDNYLEM EGKVKKAFSE YSDKELKGKY YPLDGMGKDT QKQLIADHFL FKEGDRHLQY 240
  241 ANACNFWPKG RGIFHNNDKT FLIWVNEEDH MRIISMQEGS DVGAVLDRLI KGVRGIEKQV 300
  301 PFSRDDRLGW LTFCPTNLGS TVRASVHIAL PKLAARKDFI EICEKLNLQV RGIHGEHSES 360
  361 VGGVYDISNK ARLGLSEYQA VKQMYDGVKK LIEMEEKQK

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	399	0.99