YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	snb-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAQGDAGAQ GGSQGGPRPS NKRLQQTQAQ VDEVVGIMKV NVEKVLERDQ KLSQLDDRAD  60
   61 ALQEGASQFE KSAATLKRKY WWKNIKMMII MCAIVVILII IIVLWAGGK

Type	Start	End	Confidence
Cytoplasmic	1	86	0.98
Transmembrane Helix	87	107	0.95
Non-Cytoplasmic	108	109	0.84