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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25395974
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLSKLCAG AVTQNVLKSY FLTPSQFRSF SRTITALEKS QKSPSKQEHA LQRSILEEVL  60
   61 VHEKAKPTTF GGKVAEKASN TFMYTAVVAG IGLIGAFIYV LAGEFFAQDS PQTIFNKALA 120
  121 LVRDDGRCQE IFGASIAGFG EETSRGRRRH VAHHKYEKDG MQRIRVLFHV KGDRDEGIAQ 180
  181 AEMEQRDGDW QWRHQIWARK QMPKNKKNNK KRAPASAPKP APPSAPPRLL QLASSNGEVL 240
  241 QADIRALQLS STISTTIKEL GYDKEDCAEI KPIPVDEHEY TLDLLIKWCD QHKGDDPEIA 300
  301 KAEKGKKKVV IPSWDQHFFS VLPMGNLLAV IKAAYDLDIT GLLILSPIQC FGVIFEFFFI 360
  361 EKSLRFRFSK MSEHVKRPTA TETDDDLLKM QEEWEAANKK PSVEIHKMKN RQKVEEVASL 420
  421 PSKVVRDQAA RFQIDFDEEQ AASGVLFPVK ERNFAERSEI LAENLQKFQL YSKDDGFPEP 480
  481 LDLSAYFSAE NPKTLTNLGG KSFFAAEFDR INGNLAENLD FKQETTENPS GSDDFQAENE 540
  541 KYLKSLDFEK IQEMKLEITE RFDPKLLEFL KNRGNKASEE TQKKPKKISK FKASRQQKEP 600
  601 ENEQKGAPEP PAQAPPTKVV EEMMNELEVL EEYGNREDQE KYNRLATVFW KIIDIFEIFG 660
  661 LNFFSVKNGK SEKFQDAVQL DLTAKFGRNL VSRQQKNAVK LFDNCKLRPE TSAGSTPDPI 720
  721 LELARSSIDQ IKTLYLEEIA TDSSSKSIIY EFGKGLNPIL DNCWTLIPVR RVLDAVERRH 780
  781 GTVTPDDVEI VRLSLLWTLL LFSERKSAFF AFAEPNEFYV HIAEVFLIGA EILADDVIAE 840
  841 CAHRILNGYI LAAAKDAKIG LRMSGKVAGL DAFMPFYENL LKNYEQYSMG DEHFAMTILI 900
  901 AAYLNSPVGD SSKSNFSLNL SRNSQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle