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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE17778
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIKVIVIFF ALTGCIGCDF YKLTADENKD RASTCGKEVL ERKGNETTPA NVSQTDWTLK  60
   61 MHNIDHNPDR YYLATMISTR HVLTSARLVR NESGWRDGSR DECDGKNLVV PPSLLEKVEI 120
  121 PQHAQDGSKS VSNSTRCKIT AAYILDGCAS SYPMLTAGPL IATIDYSSQS NISVPCLAQE 180
  181 ENLMNVSEIG DLYFIDDSYK LKHSKTTINH TYSLFYKTSI PTVFKSRHDY GILTNVVDNK 240
  241 MTVMAFAASD DQNTFYTMSF LYKSLCEPTG ICSLPPGELV TTTTTTTPNS KPTDKFVKLT 300
  301 SEENEKRLET CGNEKMERKA TNDTPVEVGS VNWLVTAQST TTDHIFSATM ISSRHLLFPV 360
  361 ELNNSRNNQP TYQCDDSKRH LFIPQSNLSN FDFNLPVCDQ NNQGSSVMCP PKPTKLTSGY 420
  421 ILDGCVNSTI SEPKILIGTI ENVYPANTSF PCLADENSIK RSDSGFDAYF FSHSIWMHKN 480
  481 ITVNMSTSGS LFKDPNSKLY GTSTKIVNDK ETVFGIGLTG KFAVKIAYYN DVICTLAGIC 540
  541 RQFSNDTQFP LYSNDPSSIS NSTTLSFNST QPSITSSTSP PKPLKNITPE DVEETDKDVE 600
  601 ATTEDDGNID NDLVVSMDFL DGVGHKIGII ELVLILIVRQ SNSSVPKTVY PPGWSLLITN 660
  661 KASDSQTSYL TTLISPRHAI TSAFLVRNKD GWYNRVAEAG KCDVTKNTKH LIVPQLALDD 720
  721 LEVNWSACSS RGSCRRVKIT YAYIVDGCSV KNHVMCQQPL IATFEHEEQI YPSFPCLSES 780
  781 KFNLPDQSQV DIYDYTGQSY TLEQLRKQGD YINGRYYKVG RPYQSEDYHY GILLNVIEDK 840
  841 ETVIGLEYTE WEPDENYVYF FKMSVIHEEL CNLAGICEAP WALTTTTSTT APTTEVSTST 900
  901 TTSTIAYETS PPNSKPTDEF VKLTSEENDK RLRTCGNEKL ERKATDDNYI EVNFFVKWLV 960
  961 TVKNVENIEP FLATMISSRN VLLPAYPVQK FSWINQKIHE MNTQCDENNE HRFFPKQLLT1020
 1021 HLEVRSIFCG QKYNGNCPRI QLSSAYILDG CRNVPINKSM LLIATIENGY PENTSHPCLA1080
 1081 DENTINQSDG LFDLYESTKN WHRHMSLMST NTSDDSFYVD FYIHYGIVTK IINDKETLFG1140
 1141 IGLMYDGGAK KITHYSDVIC KLAGICSQFS NGTQFPHNSN DPSSISKVTT LSFNSTQPTI1200
 1201 TKNITPVDAK VVEELDEDVE ATTEDDGNID NDLVVSMDFL DGVGHRIGII ELVVILIGIL1260
 1261 LSQLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle