YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sdhd-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLRHMAH FQKALLVARS APRISTIVRA TSTLNDGASK VPDHSMHFKL ERLWAVGMLP  60
   61 ILPASYFIHG PVMDAVLTVA LTLHIHWGIH GVVYDYARPY VIGEAAAKAA HVGVYLITGL 120
  121 LLGALLHFNT NDVGITKAFE LVFSL

Type	Start	End	Confidence
Cytoplasmic	1	52	0.92
Transmembrane Helix	53	87	0.70
Non-Cytoplasmic	88	106	0.45
Transmembrane Helix	107	129	0.85
Cytoplasmic	130	145	0.45