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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kpc-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNISWYRHC SVRLQLVTLA LFLLLGSASL GSAHIDEEFE DDVTTTISSI ASPMRRTYTN  60
   61 EWAVRIAGGK VEEANRLANK YGYTNLGPII PGDEYYLFRD DRKKSRSSRK TRSLSANQLQ 120
  121 HEEDVMWMEQ QVAKRRVKRG YRRIRRHTDD NDIFEEDDDG TQISKSRNRK HPDPNDPLWT 180
  181 DMWYLNRGEH HSDSTTRMDH NVKEAWDLGY TGKGVVVTIL DDGLERTHPD ISPNYDERAS 240
  241 YDVNDRDNDP MPRYEFSDEN RHGTRCAGEV AAIFNNSLCI VGIAYNANIG GIRMLDGDVT 300
  301 DAVEAASVGH NADYIDIYSA SWGPDDDGRT VDGPAKLTRS AFEKGITMGR KGKGSIFVWA 360
  361 SGNGGKDADS CNCDGYTNSI YTLSISSATE NGNIPWYSEA CSSTLATTYS SGATGEKMIL 420
  421 TTDLHHACTN MHTGTSASAP LAAGIVALAL EANPNLTWRD LQHIVIRTAK PINLRAGDWT 480
  481 TNGVGRNVSH SFGYGLMDAG AMVKLAKIWK KVDEQHRCRQ FYPSRYKRFS NLPEVYRSLQ 540
  541 KFPKISRFFQ KFLEVSEVHT IFQKFPGTST RFQKFPKILE IEKMFRNSKK LQVFRNIPNG 600
  601 NRLQLQLYSD GCYGGADENK VSYVEHVQAI VTLKAPKRGD LQIYLTSPSG TKSTLLTKRA 660
  661 RDTSRSGFTD WAFMTTHNWG EQAAGLWILE IDNDGWDDAE LVKWELVLYG TDRETGDFGG 720
  721 QHASPLAVRS VQMEATSSGT QYSIFHVITL VILTFSQILY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle