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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE17457
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRFFVLIT GLFCISNQEL VSKAEGCFLR CVAQCVAFVE KSDSTQQSLD ACKPQCQKLN  60
   61 NKNLCSDNTC WSTCNGELVP EKTLPAPTNL TLKGVRGLSW SPVPGAVMYY IGYRTLNSKT 120
  121 FTSDDFVITE KQTVDLSTLT NIDPCSELEV AVAAFSEDGI GNESKELKIS SPKPTANPKL 180
  181 DLLELQYLNT TLVSDFYQAN ATVHVEFRYK TDPWFLGPDD LDVQPLFHLI SCVDPDLSQG 240
  241 IPVPDFDVHV KNSTISTSIG SDMMDRKCRY VYYLQSVMSK KCNTMTEMPS PPSSALQTIQ 300
  301 VECDIVKNAP CVKVPSYQPP LCGMVENVAF SVLSRDRENL NDPASNLTVN VTFIPVTRNN 360
  361 EMPTLYYIGI FGTASEYHTK EEETFLGVNI THVIGKESSC TGFDSSGNCL AENLNRSIVL 420
  421 QGIHPKTLYG LTICAVKDIR NLTLPDVTLD SKSFRAKADR IMLVAHTSNN PVGMIIGIVI 480
  481 GSLVVILVAI VVIWFYFRKK SENMKFKFQM EQVGKNNMNR YIDFPIMAAK NDIWEIERRN 540
  541 LIIHNDKKLG SGAFGAVYLG KLIGKSLAHK DANSPLGINL MRAENCQVAV KMLPEYADEM 600
  601 SKHEFLREIA LMKTLGYHER LVNMLACVTE SEPLCLVVEY CDNGDLLKFL RERCKYMMKL 660
  661 DDLGINYHDP PENENYDTNM IVTLKQLLQF AVQISYGLEY LSQKGFVHRD VAARNVLVHE 720
  721 GTACKIGDFG LCRYIYADQS QYKSKGGKLP LKWMSPEAIR HYEFSIKSDI WSFGILLFEV 780
  781 ITLGGSPYPG MPPEDVLPFL EGGGRIEKPD NCPENFYDVM MQCWNADPDD RIEFSDVRMQ 840
  841 LATQLEDITE DYSYLKLDAA KDYYNVQYGD EKKTDVVIIP DEIIKPSKLI MDDISEKNLV 900
  901 IEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle