YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17424
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSHLSGIIY PLQKHEKSQQ TFFLMKAIVG ILRSPYPWLI LIVFVIYYFS LQVNITVKPP  60
   61 EFNAQFSTFH PEKYISSRLS PRSRLGNNIF EMASLLGISR VLNRTATFFV GNKDYLKMLN 120
  121 RVNETLPGLV DQFLIINGTV PPCARNTTFG TRCCVYEDPR VLANIDDQYL HITGIFLQSW 180
  181 KYFSNMKDEL TGYLKKSGAK FGFLPKSDKN THVNCVHVRK GDFQAVGFAT ADLKFVRSAI 240
  241 RFIEKKGKFS IWFFLHFESF NSHEIQKKNL VIQKTNSTHF ISQNMPADDL IYSKNHCDSV 300
  301 LISSPHSTFG WWIGYFSKGN KVYYMDIRET NDRRHGQLLP YDYFLPHWTP LKYASDNATV 360
  361 IESRK

Type	Start	End	Confidence
Cytoplasmic	1	33	0.81
Transmembrane Helix	34	51	0.83
Non-Cytoplasmic	52	365	0.96