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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE17393
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.81
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRAVLALL LATLATAHIK LVYPPARAPA LDFYSSSNSQ PPCGVKKPAP GEGVRTFMKA  60
   61 GSTVEMNWFV AVPHMGGIRL EVLNSSDEPI AIFTNFNDAF NVTETTKKVE LPPNFECKDC 120
  121 AIRMTTQATE YGNSYFFYSC ADINIVNVIP DGDTCVGNGN RMNGVCQCFD GFYGSECQFQ 180
  181 DECKEDDDCG VQGYCRLGGD TPRRQCFCPT SRYGKTCELE SDSIRSVSDF DETLYQKRED 240
  241 QGNKIYWRLL KDEIEFVLRY PGQSWIAVGW KSPEATCDLS AGDFAGRNVA TTSSSPSSTI 300
  301 SSIITNATSR EQNDAGDQEC GPNEQWSECP ESSRECEHSC DWTHFPETTP NCPNSCGTPR 360
  361 CICKEGFVRM ANDEDVCVPF DFCDKTVENE ETCEANSTWA KCGTACEPTC ANMYDTAPCP 420
  421 ASCEKPGCTC ADNYVRHNGK CIYWGDCPEL KDEKVTTKKH EVVETTQSTI DRNEITQPSE 480
  481 ASKGTTQKVI VTECSLNETL NECGRVCEAD CFSIFTRSEC TDCGSAACAC LQGYARNPQG 540
  541 QCVYWGDCPT DVQPTTLKST APTTPVPTQT APPSVNGDVC YGDFRYPAGC SDCEYKLSWN 600
  601 YMEETDEIEF SLETRVNDNS WTGVGFSKDG TMVDADMIIV TTRNGKIQLN DMQSRGYDQP 660
  661 AMDAVQNVKS STDVIGTYSN GVLRAQFVRK VNTGDDTDKQ FDGDSCWKML YPIAGGKLDQ 720
  721 YGNVSIHLST PLSSDKPVCI RSCTGGKKAT TSSASSAPAS YTCTNEYRFP EGCADKDCDY 780
  781 VAKWNVDSAK KDVRFEITAK TPGRWTGIGF SRDGQMTNAD MYTGWFFDGK AYIVDRFAYG 840
  841 RQLPAIDPAD RQDIYDMGGK VEDDLQTIWF RRKLISKDTK TDVSLDECHY FLFPVGGGRV 900
  901 LARKSSDFTN PKTPIGYHDQ VQPQVSATKI CLCDETGKTV SHETKAPISR RVRRAATRVA 960
  961 TSAMHCADMV VGMVSNGRAR IMDMYSPSKA TPMEDTFFGG ENSLTSAAAF QEDGVTTLIF1020
 1021 RKKLQAEEKW DNSFVNGPMT VIWAKGADPM NYVHTTGGAP IKAAPEFFEN AMKYHGKNAR1080
 1081 GVMTVNFFEE VETSVESRPQ PPTVHGMHLE DTCEGSIRHP EGCTGEQCIY TISWISDGSV1140
 1141 ARFTIHGALQ TSQWTALGFS TDGNMAAADA VVIGIQNNAV MVTDQFMPNY GRPVVDEQQD1200
 1201 IFDVETTYVN GYLTANFSRE LHSEDEFDVD LQECVFLLYS PFGGVIEKNG EIRKHETTPL1260
 1261 KSKSKICLNK CTEQKVMEAT TTTDAPEEVT AETSTTTTTD VKPVPTSTKK TISSSGTTTK1320
 1321 VLMPPMHTKH SYTVYEPEVS AKRRYGLRVR ILNREFNEAL NDPKTGYYQD FTKEVTQSID1380
 1381 ELLAKRWKGM RVSKIVGYEK GSVIAEFEVV AMEDTAKPME LKSMVEENAV RGQIGAFSIE1440
 1441 PSTVKVTEVD TTTAPSNEET LTDWRMWRNI VVIAGCSVAT AIAVLCICYM CCSKCKKRTY1500
 1501 TAYPVADHHM SYASRMLNEK GGFDNAIYHQ PQRFYSQTTV ASTKVTSASA AHGADPNGNI1560
 1561 EGPPGGVGET TYAEWYSKVG SKPASQQHEE VPPQQQQPPV QSRPPSTTPY VSYPNDPTGY1620
 1621 YTLGGRHRQN SASSNNKYAT KY

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