YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17341
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKIFEVLQF FPIETIALKN KIMHVAMAQT RFLSLFHVYN TYFHRRKCSQ ESKNNTKQGD  60
   61 WVTVVIKGAS MSRLKIYIPR GGKANVAARA APARPPPPMV KNFDRINIFN LTYMLIFLRF 120
  121 FLFFLLIYAN RFEIRWIKPD KGKKRRKVSY YSKYLEKLWY NISENLLKYG KIYADSGLKS 180
  181 LEPQSRCNFE LKIKFFQELW YNISENPLKY GKIYADSELK SLEPQSRCNF ELKIKFFQKL 240
  241 WYNISENPLK YGKIYADSEL KSLEPQSRCN FELKIKFFQK LWYNISENPL KYRKIYADSE 300
  301 LVTFETQSHV FHNFFFDFNE KYIQYYVVAA LEDFKTKFEI YANKKKLRNY KSDRSEGNQK 360
  361 FQAEEVKLME EVGKHKSEVH EALGDLVDTR SIPLSNQNIG FVSEDKCNGE GASTSFNEEA 420
  421 VFMPYLNDPV QFRKKKFALL QRSKTSMEFL RCYLFFNF

Type	Start	End	Confidence
Cytoplasmic	1	107	0.87
Transmembrane Helix	108	129	0.89
Non-Cytoplasmic	130	458	0.92