YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17141
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKRLEGPMR ELLLDISDSE KNWLYYSVVS FFVVSTIGAT ILTMSFLVLS ILLWRHFKSM  60
   61 RFFWFLTQLT TSAFVISAAN LFINIPAALS LFSKEVTQSR MFYFVSYLID FCHYSILFSN 120
  121 LVIAVQRAFV FFLRNLTDRF FESKVIYIWI SSIYIFAFGV EYALMSSNCQ YRFGELARKY 180
  181 QLICETTNYA NVVITMTTPT EVQLMETMLQ IFLPLSILII YIAITVKIIY MKGSTLSKNE 240
  241 TLILKQAIFV FLIFQASSCV FLFAQSVQIT NVGAFLVKRF VNTMEILAGA ATPSFFFFTS 300
  301 KEIRKLVSTR VSAVSSQGPS NIQVRAARTL E

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.93
Transmembrane Helix	31	54	0.90
Cytoplasmic	55	61	0.92
Transmembrane Helix	62	83	0.90
Non-Cytoplasmic	84	110	0.79
Transmembrane Helix	111	131	0.86
Cytoplasmic	132	144	0.88
Transmembrane Helix	145	165	0.94
Non-Cytoplasmic	166	208	0.96
Transmembrane Helix	209	230	0.92
Cytoplasmic	231	246	0.81
Transmembrane Helix	247	265	0.95
Non-Cytoplasmic	266	279	0.79
Transmembrane Helix	280	300	0.82
Cytoplasmic	301	331	0.89