YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17077
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVKALKFSN IFLLILLILG LYFYLIKPSR LAVVVVDGKV VDFSGVEEFI VPFVNFTQLF  60
   61 YVAPKHKLIS CGIRKSMTQL TMNIMCLLYN ETQFYDDNQS LNDTWLTERK CLENDDFIYP 120
  121 TESLENDIET ARFAFIRDPI QRFVSLYLNK CVREKSCYNC GDDMRCTVWK IYEGLKKIQD 180
  181 HWDGHSEIGF MEGHAAPLSW NCDFDKDLPK WQLLMMGADS NERKSSILHL ANILKKQGVK 240
  241 QELVEKIQED MIAGETGHST HKSAERIEAE RQVREDPFIR DLLHKIYFFD YVVFPFKRDH 300
  301 LDPKYQSNFW TLPK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.55
Transmembrane Helix	8	26	0.62
Non-Cytoplasmic	27	314	0.92