YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE16966
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYTREPCP YRIGDDIGSA FAMGLVGGSI FQAFGGYKNA AKGKKLVGMM REVRMRSTLT  60
   61 GVQFAAWGGM FSTIDCCLVA IRKKEDPINS IVSGGLTGAL LAIRSGPKVM AGSAILGSVI 120
  121 LAMIEGVGLV TTRWMGAMMD PTQPPPEALD DPRSLGQKSQ AEPGLDQTRP FGIPTGLPNL 180
  181 S

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.61
Transmembrane Helix	17	38	0.80
Cytoplasmic	39	58	0.60
Transmembrane Helix	59	81	0.77
Non-Cytoplasmic	82	109	0.41
Transmembrane Helix	110	132	0.85
Cytoplasmic	133	181	0.67