YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE16921
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQIYRSSFQ CFLFFPRSIN SDISTFIFLK LFLLIFFSVG GAHPMFPPNY KSMAPPTNPS  60
   61 FDRFSEMKTV LLLTVASLAA VLGAKPTPTE EVKSEAAAGR YGGRPSYGGG GYGNGGGYGY 120
  121 PAFGPGYWQP LIQDRFVCDL DASVLLVVDS VRRHHRHPQP YYGGAPSVPA NRAVRVKCSE 180
  181 VATHDEDSCN FCCQQTARRD TSLPNDQLFG FLAITKDDDD ETFKRSKRGA DDDDDNDSDS 240
  241 DEKDGKHGRG RFHKVDSTYL SEANWEPKKY HKNVKCVCCA PRSSPAAQNP SYNNNAAQSP 300
  301 PTGYNNNANA FVQPQPVAAQ SPPMSASQPL VDLWQSENTA PSTSWGAAPA APSTSWGAAP 360
  361 AAPPTWGGAP TAAPTWGAAN DAPPAATPAP VAASNAY

Type	Start	End	Confidence
Cytoplasmic	1	25	0.78
Transmembrane Helix	26	46	0.88
Non-Cytoplasmic	47	397	0.70