YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE16896
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGAEFRQD MPPKGGYRAF NFHRTFPKLV WSPGTVVAAI FGATAYGVYA ALEGKKKDIT  60
   61 EKFEDVDINN AMEPFLTAER DRYWLKLLAK NRALEEEIMK DVPGWKTGTW YGEPVYFTLG 120
  121 DKWWDPTATE VFVHSRGSNE TRDHLWRQHS EYAGPKFYDN WFPQWMSKWF W

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.76
Transmembrane Helix	29	52	0.70
Cytoplasmic	53	171	0.56