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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE16853
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPQDPVYSQ NDPLLLGNSN RSRSSVPWKA TAKIATVFIG ILFITSPIVF GLTGVVGKNN  60
   61 EHQHSSLANE TSWNNATEYA NLKNHSTSFT EMKKSLILNQ NKNGTVADYA TFEYNVTSDE 120
  121 YLRLNDDGTK IQPWIVKNIE RKVKFYYFES ISAIEQTAFI HKIEPNEDGV IYWKFELVDT 180
  181 PEMFVNQVTI TMKYLYKIIN NKGKAEMCID DSLKNCSDLP KDDELMIFHP KFKTFFIGIK 240
  241 MFKREDFPET GWWDTSEMGS FSVKVGSQKR FYTNLYTETG GIVEAAPRSP SSFDEKLKYI 300
  301 VGINNFNMIQ NFYSHPCSFK NFAQEKDFLL GIGYLKKIIP DEDAWIYWNI NMHDDKKQLM 360
  361 HLQIEILQMQ EIVNHGGIAE FCPNSLDNCM DIPTNGSLQF EKPPFDKFFI GIKMLNNMTT 420
  421 NHTNLPKIDN VGSFNVNGHW RLIRRREKFE RQTEPIQLIP ESGQNYIKFT YDVINNVYSH 480
  481 KNEDGSDILP TDIHWVFKLK NNGKSVKKVV IKMEGIDDIL KEDAGIIEAC SNYNINCTNI 540
  541 PTNKSLIMEY PVDMLYINVV LVENIRLFKT DVKDRMNVET FSIEVYWQET PETSTATTDV 600
  601 SQMTTTPRSI ETTTPSTSND TESNQDVIST PLLAWRQGHI DLGRISRENH VKFTYDVMRD 660
  661 TYSHTQLNGS SYVPYNVANI ERVVDKRLNQ VYLHRNDSKK DTYLNWVFDM TIDGKVVDKL 720
  721 TIKVPGMEQQ QLGIRASLEI CLIYGYEKCI AIPISGGLTI EYPQFSIFKI AYTCYENKED 780
  781 NTDLILFKSE LKEGLNVESL SVEVNWTTKG PLTNQTTLPT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle