YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE16565
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGVRLLAY GRLAVRAVFS ASALDLGSTI GPEAISSGRR GLSSGSSKPK PSSEGSPSSP  60
   61 APSAHVENVI ASCAGFPKDM LNGPSTVLDK GVFGDDAWFI SRFKNTFVVG VADGVGGWRK 120
  121 YGIDPSAFSR RLMKECEKRV QKGDFDPQKP ESLLDYAFRA SAEAPRPVGS STACVLVVHQ 180
  181 EKLYSANLGD SGFMVVRNGK IVSKSREQVH YFNAPFQLTL PPEGYQGFIG DKADMADKDE 240
  241 MAVKKGDIIL LATDGVWDNL SEQQVLDQLK ALDAGKSNVQ EVCNALALTA RRLAFDSKHN 300
  301 SPFAMKAREH GFLAPGGKPD DITLVLLLIA

Type	Start	End	Confidence
Signal Peptide	1	20	0.44
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	330	0.98