YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: twk-33
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSEQQNNYY PRGNVPRHSA VLEEIHEEEQ DSIPEEDETN LEKPSHSEND FKRKNAIRSE  60
   61 ETPEISPEIQ RIEDPLASSD EEENEKPFAR SISVSNADLE ERHRLDSIPE NDRSQQSRYT 120
  121 RHSSIDKGIL KPQNNSEDVV EKYYERNNYT VTGRDRPDFY NKLPGRLQHR LSVHTDAASR 180
  181 FSSPGAMGEP VVPTLRRFDK SMYWFAFHRK QIGFRHFSVV ILVLLYTLLG AVMFWTVESR 240
  241 HEKAKTLDHV NNLEHLLDRL AENITESVNN INTTTTEEEM KVYIREAYIE LMKLEGQYKG 300
  301 STYYKLEADD NWKWTFESAF FFSMNVYTTT GYGSIAPEST LGQVLVCVYG FIFVPVTLVV 360
  361 LRDLGQFFLV HLTKLYAHGI QKFRELNGNK HVDEDEIISL PIKACLLLLA SYLGACTIFI 420
  421 YFYDELSGPE PGTGMDMFLC FYFSFISLST IGLGDIMPNN ATVGNNRNIY ENEKIKFAPI 480
  481 ISIIFFFGMA VTKVVNRNTF IAVENGIFGA FTLVENKLDA IVTRSSASVK PEDRPSTPKV 540
  541 QRALSVDAGS EVQDETPNEI LNNLTVRSIA TFMKSNADIY GGGFGRVQLR RGDLIHSDSQ 600
  601 NQMTVNSMSQ LRHRTASQSQ PNQATGGNNN V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle