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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE16370
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEIAGPSS SNNSSQRRAT TEPPPENELQ LGLHEAQKMT WNAKVVYHTI DKCPHCDPMI  60
   61 FMNFPKKKQL KLYLNFRTIV CPENAEISKL GNSFAWEIKF NSAGFLKNCF GKISTPPFSI 120
  121 LFSFLGIFMM LHFEIQSFCN FDLFYFSFSN NFDQLPAVSC RKIGFLVIDN NKVFFRAKKP 180
  181 EIIENKIVEI LSKIWPVLIY YSKKSNSFDF PKIIHIFQSK KPSCLKEDEH MAVLVHDKTL 240
  241 AFMKPCYITV SKTDETGDHE LSFRIETTIL SEAKKTNSAA SIHRSGPSSN RNSRVYDEAA 300
  301 RQAVLAELDK DEDVVEKKKS SVMIGKPEDV TCTLSLAKGA PGLITNRIDF LKQNDIVKCT 360
  361 LETVDTVSLD NVQLTFREQY MSRADMYRYR SCLIGRMTYV EEPKRYMNIN TRISDMWRKG 420
  421 SLVRSGYVTD KTRVVFRSSS STVLIFIQMC SEMNQLDPQG DLYLEKCIKG FLTELFLKWK 480
  481 EQSCTHYVSI ILCSRWYAIG GVDDAAKRFM KGACDHRGRY YQDFYRLLFQ NEHYEDWADK 540
  541 QLKEINVGCS KYSSQIQEKL KEMLPQVQFE VSTAADGNFL QVVNMSMNSF SMYHSDRRFE 600
  601 TTGQQIIFVT PGNGVLHVDR DLVSLTKQRV IDMGISLDMV CLGEQPLHAV PLFVFHPIVG 660
  661 QMDKKCEYFI PHWMNYSYYQ MARRSAISVQ FRPRIQLPAA VLSAPKKMIM GSTGTFRCFP 720
  721 QSVEKYGGDY DAKKLSNVCA KIQLLPKEEA NDIDAVVRDA PEAGRRQLRE ILGLSPDKVK 780
  781 PNSDDKTKTS VRERKETDGE PSEDNNTQKA APIASNPPPP PPLPPPPPSV EKKKLEPQDR 840
  841 DIAGSKIIKK NSESSTYGGS VRPVSAAKDI EKPAPQRSLP PLVPNAGGSS WNNQNRPESP 900
  901 RSASYESMKM PPSSIGGSIE IGSSALTKLR ATSPSRRGTI DGSTTTLANN DLTAVWKRQN 960
  961 GQLINPFRPE DFAVQVTANR RRWIHVFPVD SSGKSKLAHH FVSGQSIVHI VGAPDEQKKI1020
 1021 VAQIGSVDTV SISKSPEQQS SSLTRSRRGA NMEDDRKHSS KSNSAGNASK KYKVWAWGST1080
 1081 GEEKWNVDME IGTDWKSLVR SALLPITTDF FPDGQTLQTQ FRMNEYSIEV TNKSLEDYRN1140
 1141 GLYEQDECAI IGTPFDSLEM SNSHHSDVQT TLQTQVKDQR YRRIRDRNEK PTMAQLVYEQ1200
 1201 LILQRLQRGY QIVLLDKSLV EVSCEAAKKP SSSRPDLSRK QVTKSEKERV GSGGSERSRS1260
 1261 NPRTIQNPEI VLSFNKFYHK LALEKDVVRI TLFRPKAEKS DEVAGFPGWC ERPSMRNEEN1320
 1321 LDEAIRPFKK NAHDDELNSR YFNTTYMYYF QVPDASTYEK SATKLRHHDL DKLNWSAFDS1380
 1381 AFKNIFSDIL YTESMKCFSA SFLVVFHPTD ILKTKLIEKQ TEGKGIEFRD PKEFESPNEA1440
 1441 WYSRLTKLLL LMNKLQYQGM VPDPNSLQDR QQKWKNKPQN YKAIVEDFKK TPYVGLKNTN1500
 1501 EKQMSVAHPA NMFVVYDFAL WLRYNVEEIS KFEIAVNLIR RLADSKFIQV ITSKGKYGSE1560
 1561 SSLNSKKMFK FKAEYGFQLC YISDPDFPEN SKVSRFMMVE YKNKICQEEE TECKWQLQGD1620
 1621 IDMELAPPTP DSPLGEWTRI TYDHWFYPDT AFRITMKWVM GTGQTVADTV LSWFNKASKQ1680
 1681 GMSLYPVPED PFALAQDTHS NPLRCPIRIQ LKEKVVAHSD EREFLLKILF RFGFIDIGCN1740
 1741 VKHDFSSPRT DSSSSDHTKA LSSPSPTLQL EGDDGDLDDV TISMNYIHQA GGMFISLVLS1800
 1801 ENPNRPPFFY WAWNHLLSNR YRGQCSEKFQ DYLLSEFRAV CSDKNDTLTQ LYSDFKKEKL1860
 1861 QKPRPATPPK FD

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