YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mboa-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	67	0.85
Transmembrane Helix	68	86	0.74
Non-Cytoplasmic	87	111	0.69
Transmembrane Helix	112	133	0.86
Cytoplasmic	134	141	0.79
Transmembrane Helix	142	163	0.88
Non-Cytoplasmic	164	175	0.70
Transmembrane Helix	176	198	0.79
Cytoplasmic	199	278	0.84
Transmembrane Helix	279	303	0.83
Non-Cytoplasmic	304	333	0.95
Transmembrane Helix	334	355	0.87
Cytoplasmic	356	398	0.95
Transmembrane Helix	399	421	0.86
Non-Cytoplasmic	422	429	0.76
Transmembrane Helix	430	450	0.82
Cytoplasmic	451	457	0.82
Transmembrane Helix	458	477	0.94
Non-Cytoplasmic	478	496	0.89

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQQTGRRRR QPSETSNGSL ASSRRSSFAQ NGNSSRKSSE MRGPCEKVVH TAQDSLFSTS  60
   61 SGWTNFRGFF NLSILLLVLS NGRVALENVI KYGILITPLQ WISTFVEHHY SIWSWPNLAL 120
  121 ILCSNIQILS VFGMEKILER GWLGNGFAAV FYTSLVIAHL TIPVVVTLTH KWKNPLWSVV 180
  181 MMGVYVIEAL KFISYGHVNY WARDARRKIT ELKTQVTDLA KKTCDPKQFW DLKDELSMHQ 240
  241 MAAQYPANLT LSNIYYFMAA PTLCYEFKFP RLLRIRKHFL IKRTVELIFL SFLIAALVQQ 300
  301 WVVPTVRNSM KPLSEMEYSR CLERLLKLAI PNHLIWLLFF YTFFHSFLNL IAELLRFADR 360
  361 EFYRDFWNAE TIGYFWKSWN IPVHRFAVRH IYSPMMRNNF SKMSAFFVVF FVSAFFHEYL 420
  421 VSVPLKIFRL WSYYGMMGQI PLSIITDKVV RGGRTGNIIV WLSLIVGQPL AILMYGHDWY 480
  481 ILNFGVSAVQ NQTVGI