YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE16156
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFFFFGFV GLLLSWGALY YRYSDEKNTS ARKYRFDPPP ALVGNLFINA GLEKAEHILD  60
   61 GKIVGPESMV VDDEAIYVSV NDAKVLKIVD GRVVSKASYS EKSKFFPDCG HFDTEPECGR 120
  121 PLGIRRLVAG KPKFVVCDAY LGVYIVDFTD EQNPISTQIL DSKVPIDGLK PRFLNDLDVI 180
  181 SEDELIISDS STRHDRRHFM AAILEHQADG RIFHLKISTK SVKVLADKLY FPNGIQLTED 240
  241 KKSVIFAECS MARIKKLTIA SKKVEMFAAN LPGLPDNIRS SGRGTYWVGL TATRSATHPS 300
  301 LLDRLGSLPG IRQFLVDIVP GPYWKPLLGL FKNPHSIIIE LDSVGKIVRS LHDVTGKHVG 360
  361 DASQVTEHNG HLYIGSFADH YIAKVKL

Type	Start	End	Confidence
Signal Peptide	1	17	0.97
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	387	0.99