YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	unc-64
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDRLSALK AAQSEDEQDD DMHMDTGNAQ YMEEFFEQVE EIRGSVDIIA NNVEEVKKKH  60
   61 SAILSNPVND QKTKEELDEL MAVIKRAANK VRGKLKLIEN AIDHDEQGAG NADLRIRKTQ 120
  121 HSTLSRRFVE VMTDYNKTQT DYRERCKGRI QRQLDIAGKQ VGDEDLEEMI ESGNPGVFTQ 180
  181 GIITDTQQAK QTLADIEARH NDIMKLESSI RELHDMFMDM AMLVESQGEM VDRIEYNVEH 240
  241 AKEFVDRAVA DTKKAVQYQS KARRKKIIIL IVVTILIGFV SLWLIQYIPG I

Type	Start	End	Confidence
Cytoplasmic	1	266	0.96
Transmembrane Helix	267	287	0.95
Non-Cytoplasmic	288	291	0.78