YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE15805
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSSKVAFTL VVSIAIVTAV PLGGILGGNG QGGLGGILGG GEGGLGGILG NGGLGGILGG  60
   61 NGLGGILGGE DGGLGGIIGQ LLGSANATDG LLGIINPADL LDLSLLGDGL TQQIIELVKK 120
  121 IPGSALPRVQ EILSNADNLG VDEVISKLNG LVPGLGDELN NLISTIFTLI KQLLNEVADI 180
  181 LQSLPDILGK LSKIVDDKNL TSIEKNNAIN QLKGTNKIEL NTIIFIITQL LNGGALPELP 240
  241 PTPINV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.81
Transmembrane Helix	7	28	0.83
Non-Cytoplasmic	29	44	0.79
Transmembrane Helix	45	67	0.73
Cytoplasmic	68	246	0.67