YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sup-17
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPIRNRLQ LVVTLIFCLF FENVNGLNNF IDNFETLNYR ATHVANQVTR RKRSIDSAAS  60
   61 HYQEPIGFRF NAYNRTFHVQ LHPIDDSLFH EDHMSDVDGG YADIKPSHFL YEGYLKDDPN 120
  121 SHVHGSVFDG VFEGHIQTGE GRRYSIDKAA KYFERDDRPT QYHSIIYRDD EINHRKWRVK 180
  181 RDAENLSEQM QGCGFSSRVR REMTDVQNSG ESTDFFTNYM TMGGRSKRAN TLRDHDGLYF 240
  241 VRTCSLYMQA DHKLYEHIRM KEGNNDPIRT REEIVSLFYN HIKAVNEIYE GTNFNGIKGL 300
  301 HFVIQRTSIY TPDSCDRGRA KTDSDNPFCE ENVDVSNFLN LNSQRNHSAF CLAYALTFRD 360
  361 FVGGTLGLAW VASPQFNTAG GICQVHQRYN EGSRGWVYRS LNTGIVTLVN YGNRVPARVS 420
  421 QLTLAHEIGH NFGSPHDFPA ECQPGLPDGN FIMFASATSG DKPNNGKFSP CSVKNISAVL 480
  481 AVVLKSMPVD PTRNASPVGI GKRNCFQERT SAFCGNQIYE PGEECDCGFS QADCDQMGDK 540
  541 CCVPHEARGN GGPGPCKRKP GAQCSPSQGY CCNPDTCSLH GKNEEKICRQ ESECSNLQTC 600
  601 DGRNAQCPVS PPKHDGIPCQ DSTKVCSSGQ CNGSVCAMFG LEDCFLTEGK ADELCFLACI 660
  661 KDGKCTSSVH LPEFSANRTN FLQNMRKDKP GLILHPGSPC NNYKGYCDIF RKCRSVDANG 720
  721 PLARLKNLLF NKRTIETLTQ WAQDNWWVVG VGGLVFLVIM ALFVKCCAVH TPSTNPNKPP 780
  781 ALNIYQTLTR PGTLIRQHRQ RHRAAAGSVP PGPGAQPRSG AASAPSRTTP SARPSAPPLV 840
  841 APQVAVAVPP GVVGPPIPLI ATHPGSSSST PAVIVLEPPP PYTAADPGSA MGGPRRGHRK 900
  901 NKRQTSSDAA GSSGNGGKKK GK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle