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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE15735
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRAKQRLSQ IVAAIQIISV ALSHSIQTHL LYLPPLTWKG AQSRGRPPRV VRSSPPLSLS  60
   61 LRGSHSCSLT GANSSATTVC RYILFVFLLL SSRSYLIHNT PPIRTNTQYN NIQTLLSLFP 120
  121 TIHSKHFLLF MVLYQLLFLL FFRRVNGLTF PPTSPISHIY CLQPYVPENA HVIFNEPGPY 180
  181 ATDTVAKYSC ALGFDLIGSE ERTCLSDGSW SDEPPICAID VAYNKPVTQS SGNVAMSLGG 240
  241 TMCTMTNDES KSFWEVDLLG DYSIRSISMR LGTKSSPIVS VEAIETGGAV HQCIVDSSLF 300
  301 TINTTTSISC SYDNISRLRI TATRRLHLCQ VNVYAVNAVS PWQCAQSQME VVGVFGGMCY 360
  361 AASRDEQTDW LGAQRKCLDR GSTLPLRIDD STRRGLRSAL SASSSAKAFY WIGASSSMTE 420
  421 WRWVDGEGVG DSADWPGQPS PVPSASEAVL LARPLEWKWV PASQTAWNSF LCQSKPKFCT 480
  481 SPGVGEATKV TFSSHSYAIG TLCFYSCDSG YDLHGIRQRE CAENGRWTGS IPNCYRKSCG 540
  541 AVRQWKFGRI KLLNKTTLFE SEVEYECSNG WHLANSPSPS YRSLRRVCQS DGIWSGSEPT 600
  601 CELVDCGRPP LIANGRVDVE SSTFESAANY TCHQGFRLIG PESLMCGDRG EWQPATPFCY 660
  661 DIATLQEIRG STSHEHSNDN SSDSTIAMAV LASVIVAILC YGITKFAKST NHSNGDLSIS 720
  721 RDKLNASNAA IYATPSIPPQ RPDSVIYYAP TVAHMEVPPH LLQLQQLPNG NIHVTLPIGR 780
  781 QMGRPSLPPS MLFNPSIPPP SPTPSQILYS FDHEPIYDTP PDTIPYQPES VYERLPDRPA 840
  841 PPPPIPIRAE SGGNGIDLPL PPPPLLPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle