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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7496666
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPADNFYVS NALAAETFVP GEHSRRRRWW ETSNLQVGLA RPRDKKILSF RRHCHRVERW  60
   61 TCGRIANRLF PTIQLLTGSM NYLLLVSGLL SVWQPVFGSR CGESTIPFSL EILPSGHPVL 120
  121 GCARPTCFGW HPKGYQLPTT AKFSRLNRKL DGFLRDDSLF TYPFETDSSK IYKVQNSTCE 180
  181 PGFQSSKCDS KDQWVGGIEP ETDAFQDVAY QCCTYAPLRE STDRNIATVS AGEIVIGGEV 240
  241 YQNESQYAFD YISNIEKSMD ENGEVYYEVN IRRFACLDPH NADRRIDEVW SSENTIRKVN 300
  301 GQKPIAQQAP NVAVNAPIEA GTFDGEVVDG QTVVIEEIIA QQGFIVENET TVAPFAGPFQ 360
  361 AQGFQPRFGA PQGFQPAFQQ PPPQQFFPQN FQPVVQQPVQ FPAQPVGYAP YAPAGWQLHY 420
  421 CFPADAEVNV YEKGVKRMDE LEVGDWVQAL HGKETTYSPV KYWLHRDPEQ EAEFVEFLLE 480
  481 NGESFTLTEK HLVFATDCQQ NVKNLDDLNP TSTGKINIGE CFFMAQPENA SKFQKVQILD 540
  541 IQRVRKTGIY APMTSLGHLL VNQIHTSCHS EIDHHLLQNS FFKHVLKLKN RISKYFWNEE 600
  601 SNTEGNIGTS LNFLIEIFEL IVPSKMISY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle